Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.77■□□□□ 0.76
ATN1P54259 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATN1P54259 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.77■□□□□ 0.75
ATN1P54259 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ATN1P54259 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.76■□□□□ 0.75
ATN1P54259 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 AC073592.4-201ENST00000623827 446 ntBASIC19.76■□□□□ 0.75
ATN1P54259 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.76■□□□□ 0.75
ATN1P54259 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
ATN1P54259 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATN1P54259 AL049812.1-201ENST00000432563 2267 ntBASIC19.76■□□□□ 0.75
ATN1P54259 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATN1P54259 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
ATN1P54259 ELK2BP-201ENST00000415014 1224 ntBASIC19.75■□□□□ 0.75
ATN1P54259 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.75■□□□□ 0.75
ATN1P54259 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.75■□□□□ 0.75
ATN1P54259 VN2R19P-201ENST00000442399 1052 ntBASIC19.75■□□□□ 0.75
ATN1P54259 AC108073.2-201ENST00000464002 357 ntBASIC19.75■□□□□ 0.75
ATN1P54259 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.75■□□□□ 0.75
ATN1P54259 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.75■□□□□ 0.75
ATN1P54259 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.75■□□□□ 0.75
ATN1P54259 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
ATN1P54259 AC027612.4-201ENST00000605371 583 ntBASIC19.75■□□□□ 0.75
ATN1P54259 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.75■□□□□ 0.75
ATN1P54259 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATN1P54259 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.75■□□□□ 0.75
ATN1P54259 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 AC006504.4-201ENST00000592118 1568 ntBASIC19.74■□□□□ 0.75
ATN1P54259 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
ATN1P54259 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ATN1P54259 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATN1P54259 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 MKNK2P1-201ENST00000437526 628 ntBASIC19.74■□□□□ 0.75
ATN1P54259 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.74■□□□□ 0.75
ATN1P54259 PRYP5-201ENST00000451909 266 ntBASIC19.74■□□□□ 0.75
ATN1P54259 COX20P2-201ENST00000452636 358 ntBASIC19.74■□□□□ 0.75
ATN1P54259 SPCS2P1-201ENST00000561636 679 ntBASIC19.74■□□□□ 0.75
ATN1P54259 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.74■□□□□ 0.75
ATN1P54259 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ATN1P54259 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
ATN1P54259 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.74■□□□□ 0.75
ATN1P54259 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATN1P54259 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATN1P54259 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.74■□□□□ 0.75
ATN1P54259 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATN1P54259 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATN1P54259 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATN1P54259 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATN1P54259 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATN1P54259 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.73■□□□□ 0.75
ATN1P54259 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.73■□□□□ 0.75
ATN1P54259 AC005082.1-201ENST00000413042 2259 ntBASIC19.73■□□□□ 0.75
ATN1P54259 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATN1P54259 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATN1P54259 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms