Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CX3CR1P49238 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CX3CR1P49238 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CX3CR1P49238 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.85■□□□□ 0.13
CX3CR1P49238 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 AP000523.1-201ENST00000398242 1049 ntBASIC15.85■□□□□ 0.13
CX3CR1P49238 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.85■□□□□ 0.13
CX3CR1P49238 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.85■□□□□ 0.13
CX3CR1P49238 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CX3CR1P49238 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CX3CR1P49238 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CX3CR1P49238 KRT18P22-201ENST00000402024 1347 ntBASIC15.85■□□□□ 0.13
CX3CR1P49238 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CX3CR1P49238 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CX3CR1P49238 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CX3CR1P49238 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CX3CR1P49238 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CX3CR1P49238 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CX3CR1P49238 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.85■□□□□ 0.13
CX3CR1P49238 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CX3CR1P49238 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CX3CR1P49238 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
CX3CR1P49238 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CX3CR1P49238 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.84■□□□□ 0.13
CX3CR1P49238 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.84■□□□□ 0.13
CX3CR1P49238 ECEL1P3-201ENST00000427961 737 ntBASIC15.84■□□□□ 0.13
CX3CR1P49238 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
CX3CR1P49238 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.84■□□□□ 0.13
CX3CR1P49238 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.84■□□□□ 0.13
CX3CR1P49238 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.84■□□□□ 0.13
CX3CR1P49238 MIR3917-201ENST00000580971 93 ntBASIC15.84■□□□□ 0.13
CX3CR1P49238 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.84■□□□□ 0.13
CX3CR1P49238 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CX3CR1P49238 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CX3CR1P49238 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CX3CR1P49238 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CX3CR1P49238 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CX3CR1P49238 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CX3CR1P49238 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CX3CR1P49238 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CX3CR1P49238 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CX3CR1P49238 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.83■□□□□ 0.13
CX3CR1P49238 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.83■□□□□ 0.13
CX3CR1P49238 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CX3CR1P49238 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CX3CR1P49238 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CX3CR1P49238 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
CX3CR1P49238 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.83■□□□□ 0.13
CX3CR1P49238 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CX3CR1P49238 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CX3CR1P49238 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.83■□□□□ 0.12
CX3CR1P49238 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CX3CR1P49238 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CX3CR1P49238 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CX3CR1P49238 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CX3CR1P49238 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CX3CR1P49238 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.83■□□□□ 0.12
CX3CR1P49238 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CX3CR1P49238 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.83■□□□□ 0.12
CX3CR1P49238 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.83■□□□□ 0.12
CX3CR1P49238 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CX3CR1P49238 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CX3CR1P49238 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CX3CR1P49238 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CX3CR1P49238 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CX3CR1P49238 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.83■□□□□ 0.12
CX3CR1P49238 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.83■□□□□ 0.12
CX3CR1P49238 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CX3CR1P49238 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CX3CR1P49238 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CX3CR1P49238 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CX3CR1P49238 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CX3CR1P49238 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CX3CR1P49238 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.82■□□□□ 0.12
CX3CR1P49238 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms