Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HADHAP40939 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HADHAP40939 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.24■□□□□ 0.51
HADHAP40939 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HADHAP40939 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.24■□□□□ 0.51
HADHAP40939 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.24■□□□□ 0.51
HADHAP40939 LINC00896-202ENST00000609602 2128 ntBASIC18.24■□□□□ 0.51
HADHAP40939 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.24■□□□□ 0.51
HADHAP40939 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.24■□□□□ 0.51
HADHAP40939 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HADHAP40939 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HADHAP40939 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.24■□□□□ 0.51
HADHAP40939 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HADHAP40939 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.23■□□□□ 0.51
HADHAP40939 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 LINC01126-201ENST00000623515 1646 ntBASIC18.23■□□□□ 0.51
HADHAP40939 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.23■□□□□ 0.51
HADHAP40939 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HADHAP40939 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HADHAP40939 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HADHAP40939 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HADHAP40939 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.23■□□□□ 0.51
HADHAP40939 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.23■□□□□ 0.51
HADHAP40939 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.23■□□□□ 0.51
HADHAP40939 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 AC092647.4-201ENST00000457211 535 ntBASIC18.23■□□□□ 0.51
HADHAP40939 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.23■□□□□ 0.51
HADHAP40939 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
HADHAP40939 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
HADHAP40939 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HADHAP40939 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HADHAP40939 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HADHAP40939 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.22■□□□□ 0.51
HADHAP40939 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 FAM8A6P-201ENST00000407496 1135 ntBASIC18.22■□□□□ 0.51
HADHAP40939 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.22■□□□□ 0.51
HADHAP40939 LINC01238-205ENST00000567549 1107 ntBASIC18.22■□□□□ 0.51
HADHAP40939 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.22■□□□□ 0.51
HADHAP40939 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HADHAP40939 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HADHAP40939 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
HADHAP40939 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HADHAP40939 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.21■□□□□ 0.51
HADHAP40939 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HADHAP40939 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HADHAP40939 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.21■□□□□ 0.51
HADHAP40939 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HADHAP40939 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HADHAP40939 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.21■□□□□ 0.51
HADHAP40939 SPDYE15P-201ENST00000424157 909 ntBASIC18.21■□□□□ 0.51
HADHAP40939 AC104076.2-201ENST00000448912 469 ntBASIC18.21■□□□□ 0.51
HADHAP40939 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.21■□□□□ 0.51
HADHAP40939 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.21■□□□□ 0.51
HADHAP40939 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HADHAP40939 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.21■□□□□ 0.51
HADHAP40939 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.21■□□□□ 0.51
HADHAP40939 AL136038.4-201ENST00000603606 1261 ntBASIC18.21■□□□□ 0.51
HADHAP40939 AL590326.2-201ENST00000625139 305 ntBASIC18.21■□□□□ 0.51
HADHAP40939 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms