Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 MIR149-201ENST00000384879 89 ntBASIC15.86■□□□□ 0.13
THBS4P35443 HLA-F-220ENST00000434407 884 ntBASIC15.86■□□□□ 0.13
THBS4P35443 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.86■□□□□ 0.13
THBS4P35443 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.86■□□□□ 0.13
THBS4P35443 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.86■□□□□ 0.13
THBS4P35443 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
THBS4P35443 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.86■□□□□ 0.13
THBS4P35443 AC116407.4-201ENST00000623319 1061 ntBASIC15.86■□□□□ 0.13
THBS4P35443 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.86■□□□□ 0.13
THBS4P35443 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.86■□□□□ 0.13
THBS4P35443 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.86■□□□□ 0.13
THBS4P35443 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
THBS4P35443 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.86■□□□□ 0.13
THBS4P35443 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.86■□□□□ 0.13
THBS4P35443 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THBS4P35443 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
THBS4P35443 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
THBS4P35443 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.85■□□□□ 0.13
THBS4P35443 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.85■□□□□ 0.13
THBS4P35443 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THBS4P35443 AL163051.1-201ENST00000569214 1512 ntBASIC15.85■□□□□ 0.13
THBS4P35443 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THBS4P35443 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THBS4P35443 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
THBS4P35443 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.85■□□□□ 0.13
THBS4P35443 AL645929.1-201ENST00000420084 975 ntBASIC15.85■□□□□ 0.13
THBS4P35443 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THBS4P35443 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.85■□□□□ 0.13
THBS4P35443 AC009065.1-201ENST00000564055 1225 ntBASIC15.85■□□□□ 0.13
THBS4P35443 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.85■□□□□ 0.13
THBS4P35443 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.85■□□□□ 0.13
THBS4P35443 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.85■□□□□ 0.13
THBS4P35443 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.85■□□□□ 0.13
THBS4P35443 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.85■□□□□ 0.13
THBS4P35443 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.85■□□□□ 0.13
THBS4P35443 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.85■□□□□ 0.13
THBS4P35443 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
THBS4P35443 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.85■□□□□ 0.13
THBS4P35443 FZD10-202ENST00000539839 3282 ntBASIC15.85■□□□□ 0.13
THBS4P35443 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
THBS4P35443 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THBS4P35443 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
THBS4P35443 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THBS4P35443 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.85■□□□□ 0.13
THBS4P35443 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.85■□□□□ 0.13
THBS4P35443 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.85■□□□□ 0.13
THBS4P35443 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS4P35443 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
THBS4P35443 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
THBS4P35443 AL096828.2-201ENST00000567259 1965 ntBASIC15.84■□□□□ 0.13
THBS4P35443 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS4P35443 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS4P35443 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.84■□□□□ 0.13
THBS4P35443 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 PVRIG2P-201ENST00000435460 978 ntBASIC15.84■□□□□ 0.13
THBS4P35443 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
THBS4P35443 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.84■□□□□ 0.13
THBS4P35443 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.84■□□□□ 0.13
THBS4P35443 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS4P35443 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
THBS4P35443 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
THBS4P35443 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS4P35443 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
THBS4P35443 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS4P35443 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS4P35443 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
THBS4P35443 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
THBS4P35443 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
THBS4P35443 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms