Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.99■□□□□ 0.63
RFC1P35251 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC1P35251 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
RFC1P35251 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.99■□□□□ 0.63
RFC1P35251 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 TMPOP1-202ENST00000424642 1267 ntBASIC18.99■□□□□ 0.63
RFC1P35251 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.99■□□□□ 0.63
RFC1P35251 AC063952.2-201ENST00000498792 1227 ntBASIC18.99■□□□□ 0.63
RFC1P35251 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC1P35251 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.99■□□□□ 0.63
RFC1P35251 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC1P35251 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RFC1P35251 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.99■□□□□ 0.63
RFC1P35251 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.99■□□□□ 0.63
RFC1P35251 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
RFC1P35251 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFC1P35251 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.99■□□□□ 0.63
RFC1P35251 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.99■□□□□ 0.63
RFC1P35251 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RFC1P35251 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.98■□□□□ 0.63
RFC1P35251 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 KRT89P-201ENST00000620027 1478 ntBASIC18.98■□□□□ 0.63
RFC1P35251 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
RFC1P35251 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.98■□□□□ 0.63
RFC1P35251 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RFC1P35251 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RFC1P35251 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
RFC1P35251 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.98■□□□□ 0.63
RFC1P35251 HBZP1-201ENST00000354915 429 ntBASIC18.98■□□□□ 0.63
RFC1P35251 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.98■□□□□ 0.63
RFC1P35251 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.98■□□□□ 0.63
RFC1P35251 AC112907.2-201ENST00000448639 330 ntBASIC18.98■□□□□ 0.63
RFC1P35251 DUX4L26-201ENST00000489078 1255 ntBASIC18.98■□□□□ 0.63
RFC1P35251 AC113404.2-201ENST00000507884 177 ntBASIC18.98■□□□□ 0.63
RFC1P35251 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
RFC1P35251 DUTP2-201ENST00000519164 463 ntBASIC18.98■□□□□ 0.63
RFC1P35251 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.98■□□□□ 0.63
RFC1P35251 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RFC1P35251 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFC1P35251 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RFC1P35251 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RFC1P35251 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.97■□□□□ 0.63
RFC1P35251 AC134043.2-201ENST00000624206 2238 ntBASIC18.97■□□□□ 0.63
RFC1P35251 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RFC1P35251 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.97■□□□□ 0.63
RFC1P35251 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RFC1P35251 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.97■□□□□ 0.63
RFC1P35251 FAM8A6P-201ENST00000407496 1135 ntBASIC18.97■□□□□ 0.63
RFC1P35251 AC092647.4-201ENST00000457211 535 ntBASIC18.97■□□□□ 0.63
RFC1P35251 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.97■□□□□ 0.63
RFC1P35251 KRT18P21-201ENST00000515767 1272 ntBASIC18.97■□□□□ 0.63
RFC1P35251 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.97■□□□□ 0.63
RFC1P35251 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.97■□□□□ 0.63
RFC1P35251 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.97■□□□□ 0.63
RFC1P35251 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RFC1P35251 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.97■□□□□ 0.63
RFC1P35251 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.97■□□□□ 0.63
RFC1P35251 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
RFC1P35251 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFC1P35251 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms