Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HOXA11P31270 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 AC100803.2-201ENST00000562459 1963 ntBASIC19.41■□□□□ 0.7
HOXA11P31270 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA11P31270 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXA11P31270 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXA11P31270 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXA11P31270 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA11P31270 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA11P31270 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXA11P31270 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA11P31270 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXA11P31270 AC021087.4-201ENST00000563761 564 ntBASIC19.4■□□□□ 0.7
HOXA11P31270 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA11P31270 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXA11P31270 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXA11P31270 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HOXA11P31270 REXO1L9P-201ENST00000604264 2108 ntBASIC19.4■□□□□ 0.7
HOXA11P31270 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA11P31270 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA11P31270 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
HOXA11P31270 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.39■□□□□ 0.7
HOXA11P31270 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
HOXA11P31270 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA11P31270 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA11P31270 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXA11P31270 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HOXA11P31270 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXA11P31270 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXA11P31270 COX5BP2-201ENST00000392354 334 ntBASIC19.39■□□□□ 0.69
HOXA11P31270 AL022342.1-201ENST00000400363 863 ntBASIC19.39■□□□□ 0.69
HOXA11P31270 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXA11P31270 SCARNA2-201ENST00000458748 420 ntBASIC19.39■□□□□ 0.69
HOXA11P31270 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA11P31270 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXA11P31270 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXA11P31270 AL049840.3-201ENST00000602669 611 ntBASIC19.39■□□□□ 0.69
HOXA11P31270 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA11P31270 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HOXA11P31270 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA11P31270 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA11P31270 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA11P31270 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HOXA11P31270 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXA11P31270 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HOXA11P31270 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXA11P31270 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 PMPCAP1-201ENST00000508114 1576 ntBASIC19.38■□□□□ 0.69
HOXA11P31270 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.38■□□□□ 0.69
HOXA11P31270 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXA11P31270 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXA11P31270 AD001527.2-201ENST00000622994 785 ntBASIC19.38■□□□□ 0.69
HOXA11P31270 AL356309.3-201ENST00000624132 1934 ntBASIC19.38■□□□□ 0.69
HOXA11P31270 FAM215A-202ENST00000632077 792 ntBASIC19.38■□□□□ 0.69
HOXA11P31270 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXA11P31270 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA11P31270 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXA11P31270 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA11P31270 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXA11P31270 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA11P31270 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA11P31270 AP000997.3-201ENST00000623333 2250 ntBASIC19.37■□□□□ 0.69
HOXA11P31270 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXA11P31270 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA11P31270 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA11P31270 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXA11P31270 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms