Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RAB4AP20338 AC008741.2-201ENST00000612792 3115 ntBASIC13.83□□□□□ -0.2
RAB4AP20338 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.83□□□□□ -0.2
RAB4AP20338 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.83□□□□□ -0.2
RAB4AP20338 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB4AP20338 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB4AP20338 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB4AP20338 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB4AP20338 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB4AP20338 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB4AP20338 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RAB4AP20338 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB4AP20338 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
RAB4AP20338 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB4AP20338 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB4AP20338 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB4AP20338 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB4AP20338 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.82□□□□□ -0.2
RAB4AP20338 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB4AP20338 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.82□□□□□ -0.2
RAB4AP20338 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB4AP20338 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 AL121761.2-201ENST00000598007 1648 ntBASIC13.82□□□□□ -0.2
RAB4AP20338 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RAB4AP20338 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RAB4AP20338 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB4AP20338 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB4AP20338 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RAB4AP20338 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RAB4AP20338 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB4AP20338 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB4AP20338 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB4AP20338 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB4AP20338 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms