Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD28P10747 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CD28P10747 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.08□□□□□ -0.16
CD28P10747 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.08□□□□□ -0.16
CD28P10747 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 AC132008.2-207ENST00000454517 770 ntBASIC14.08□□□□□ -0.16
CD28P10747 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.08□□□□□ -0.16
CD28P10747 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.08□□□□□ -0.16
CD28P10747 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CD28P10747 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.08□□□□□ -0.16
CD28P10747 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.08□□□□□ -0.16
CD28P10747 AC005336.2-201ENST00000593183 939 ntBASIC14.08□□□□□ -0.16
CD28P10747 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD28P10747 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD28P10747 AC114341.1-201ENST00000618070 349 ntBASIC14.08□□□□□ -0.16
CD28P10747 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CD28P10747 TP73-AS1-207ENST00000624167 988 ntBASIC14.08□□□□□ -0.16
CD28P10747 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD28P10747 HLA-A-201ENST00000376802 1334 ntBASIC14.08□□□□□ -0.16
CD28P10747 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.08□□□□□ -0.16
CD28P10747 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.08□□□□□ -0.16
CD28P10747 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.08□□□□□ -0.16
CD28P10747 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD28P10747 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CD28P10747 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.07□□□□□ -0.16
CD28P10747 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.07□□□□□ -0.16
CD28P10747 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CD28P10747 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD28P10747 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CD28P10747 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.07□□□□□ -0.16
CD28P10747 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 RCN1P2-201ENST00000398357 915 ntBASIC14.07□□□□□ -0.16
CD28P10747 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD28P10747 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.07□□□□□ -0.16
CD28P10747 FAM197Y8-203ENST00000450145 560 ntBASIC14.07□□□□□ -0.16
CD28P10747 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.07□□□□□ -0.16
CD28P10747 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.07□□□□□ -0.16
CD28P10747 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.07□□□□□ -0.16
CD28P10747 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.07□□□□□ -0.16
CD28P10747 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.07□□□□□ -0.16
CD28P10747 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CD28P10747 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 LINC01126-201ENST00000623515 1646 ntBASIC14.07□□□□□ -0.16
CD28P10747 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CD28P10747 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.07□□□□□ -0.16
CD28P10747 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.07□□□□□ -0.16
CD28P10747 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD28P10747 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.07□□□□□ -0.16
CD28P10747 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD28P10747 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
CD28P10747 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.06□□□□□ -0.16
CD28P10747 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.06□□□□□ -0.16
CD28P10747 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.06□□□□□ -0.16
CD28P10747 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
CD28P10747 AC120114.3-201ENST00000611923 658 ntBASIC14.06□□□□□ -0.16
CD28P10747 AC009154.2-201ENST00000621177 724 ntBASIC14.06□□□□□ -0.16
CD28P10747 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.06□□□□□ -0.16
CD28P10747 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.06□□□□□ -0.16
CD28P10747 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
CD28P10747 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.06□□□□□ -0.16
CD28P10747 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD28P10747 TP73-AS1-210ENST00000637775 1455 ntBASIC14.06□□□□□ -0.16
CD28P10747 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms