Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AC007663.1-201ENST00000438948 1240 ntBASIC16.84■□□□□ 0.29
OPN1SWP03999 CCR12P-201ENST00000446203 998 ntBASIC16.84■□□□□ 0.29
OPN1SWP03999 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.84■□□□□ 0.29
OPN1SWP03999 BX088651.1-201ENST00000540551 451 ntBASIC16.84■□□□□ 0.29
OPN1SWP03999 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.84■□□□□ 0.29
OPN1SWP03999 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
OPN1SWP03999 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.84■□□□□ 0.29
OPN1SWP03999 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.84■□□□□ 0.29
OPN1SWP03999 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.84■□□□□ 0.29
OPN1SWP03999 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
OPN1SWP03999 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
OPN1SWP03999 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
OPN1SWP03999 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
OPN1SWP03999 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
OPN1SWP03999 AC099398.1-201ENST00000567919 2776 ntBASIC16.83■□□□□ 0.29
OPN1SWP03999 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
OPN1SWP03999 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
OPN1SWP03999 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.83■□□□□ 0.28
OPN1SWP03999 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
OPN1SWP03999 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.83■□□□□ 0.28
OPN1SWP03999 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.83■□□□□ 0.28
OPN1SWP03999 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
OPN1SWP03999 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.83■□□□□ 0.28
OPN1SWP03999 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.83■□□□□ 0.28
OPN1SWP03999 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.83■□□□□ 0.28
OPN1SWP03999 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
OPN1SWP03999 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.83■□□□□ 0.28
OPN1SWP03999 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 AC009065.1-201ENST00000564055 1225 ntBASIC16.83■□□□□ 0.28
OPN1SWP03999 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.83■□□□□ 0.28
OPN1SWP03999 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OPN1SWP03999 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.83■□□□□ 0.28
OPN1SWP03999 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.82■□□□□ 0.28
OPN1SWP03999 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.82■□□□□ 0.28
OPN1SWP03999 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
OPN1SWP03999 AC132938.6-201ENST00000623828 1655 ntBASIC16.82■□□□□ 0.28
OPN1SWP03999 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.82■□□□□ 0.28
OPN1SWP03999 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 FITM1-202ENST00000559294 800 ntBASIC16.82■□□□□ 0.28
OPN1SWP03999 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.82■□□□□ 0.28
OPN1SWP03999 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.82■□□□□ 0.28
OPN1SWP03999 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.82■□□□□ 0.28
OPN1SWP03999 AC010240.3-201ENST00000607688 395 ntBASIC16.82■□□□□ 0.28
OPN1SWP03999 AC116562.4-202ENST00000641738 218 ntBASIC16.82■□□□□ 0.28
OPN1SWP03999 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.82■□□□□ 0.28
OPN1SWP03999 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.82■□□□□ 0.28
OPN1SWP03999 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OPN1SWP03999 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OPN1SWP03999 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.81■□□□□ 0.28
OPN1SWP03999 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OPN1SWP03999 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OPN1SWP03999 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.81■□□□□ 0.28
OPN1SWP03999 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
OPN1SWP03999 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPN1SWP03999 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPN1SWP03999 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPN1SWP03999 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OPN1SWP03999 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
OPN1SWP03999 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
OPN1SWP03999 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms