Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC093677.2-201ENST00000600169 1863 ntBASIC14.18□□□□□ -0.14
TRGV3P03979 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.18□□□□□ -0.14
TRGV3P03979 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.18□□□□□ -0.14
TRGV3P03979 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.18□□□□□ -0.14
TRGV3P03979 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.18□□□□□ -0.14
TRGV3P03979 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.18□□□□□ -0.14
TRGV3P03979 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.18□□□□□ -0.14
TRGV3P03979 AL445228.2-201ENST00000605589 952 ntBASIC14.18□□□□□ -0.14
TRGV3P03979 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.18□□□□□ -0.14
TRGV3P03979 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.18□□□□□ -0.14
TRGV3P03979 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.18□□□□□ -0.14
TRGV3P03979 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRGV3P03979 KRT89P-201ENST00000620027 1478 ntBASIC14.18□□□□□ -0.14
TRGV3P03979 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRGV3P03979 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.18□□□□□ -0.14
TRGV3P03979 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRGV3P03979 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
TRGV3P03979 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 MIR662-201ENST00000384847 95 ntBASIC14.17□□□□□ -0.14
TRGV3P03979 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.17□□□□□ -0.14
TRGV3P03979 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.17□□□□□ -0.14
TRGV3P03979 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.17□□□□□ -0.14
TRGV3P03979 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.17□□□□□ -0.14
TRGV3P03979 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRGV3P03979 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.17□□□□□ -0.14
TRGV3P03979 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.17□□□□□ -0.14
TRGV3P03979 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 ABALON-201ENST00000629058 1903 ntBASIC14.17□□□□□ -0.14
TRGV3P03979 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRGV3P03979 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRGV3P03979 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRGV3P03979 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRGV3P03979 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 AL390961.4-201ENST00000623958 2535 ntBASIC14.16□□□□□ -0.14
TRGV3P03979 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRGV3P03979 BICD1-207ENST00000551848 1962 ntBASIC14.16□□□□□ -0.14
TRGV3P03979 AL096828.2-201ENST00000567259 1965 ntBASIC14.16□□□□□ -0.14
TRGV3P03979 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms