Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
CBX6O95503 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX6O95503 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX6O95503 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CBX6O95503 LINC00602-201ENST00000629776 2065 ntBASIC17.97■□□□□ 0.47
CBX6O95503 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX6O95503 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX6O95503 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CBX6O95503 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CBX6O95503 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX6O95503 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CBX6O95503 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX6O95503 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX6O95503 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX6O95503 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CBX6O95503 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX6O95503 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.96■□□□□ 0.47
CBX6O95503 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX6O95503 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX6O95503 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.96■□□□□ 0.47
CBX6O95503 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CBX6O95503 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX6O95503 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CBX6O95503 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CBX6O95503 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CBX6O95503 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.95■□□□□ 0.46
CBX6O95503 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CBX6O95503 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CBX6O95503 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 KRT8P32-201ENST00000512863 1461 ntBASIC17.95■□□□□ 0.46
CBX6O95503 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CBX6O95503 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 NIFKP9-201ENST00000419265 221 ntBASIC17.95■□□□□ 0.46
CBX6O95503 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.95■□□□□ 0.46
CBX6O95503 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.95■□□□□ 0.46
CBX6O95503 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.95■□□□□ 0.46
CBX6O95503 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.95■□□□□ 0.46
CBX6O95503 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.95■□□□□ 0.46
CBX6O95503 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CBX6O95503 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CBX6O95503 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.95■□□□□ 0.46
CBX6O95503 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CBX6O95503 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.95■□□□□ 0.46
CBX6O95503 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CBX6O95503 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.95■□□□□ 0.46
CBX6O95503 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CBX6O95503 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CBX6O95503 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CBX6O95503 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms