Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF2O60811 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF2O60811 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF2O60811 LTB4R2-202ENST00000528054 3092 ntBASIC16.91■□□□□ 0.3
PRAMEF2O60811 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEF2O60811 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEF2O60811 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEF2O60811 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEF2O60811 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF2O60811 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF2O60811 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEF2O60811 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF2O60811 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEF2O60811 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 Z83836.1-201ENST00000624605 1642 ntBASIC16.9■□□□□ 0.3
PRAMEF2O60811 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF2O60811 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF2O60811 REXO1L9P-201ENST00000604264 2108 ntBASIC16.9■□□□□ 0.3
PRAMEF2O60811 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF2O60811 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
PRAMEF2O60811 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 AC005332.3-201ENST00000589904 676 ntBASIC16.89■□□□□ 0.29
PRAMEF2O60811 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF2O60811 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEF2O60811 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF2O60811 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF2O60811 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF2O60811 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF2O60811 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF2O60811 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF2O60811 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEF2O60811 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF2O60811 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEF2O60811 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF2O60811 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF2O60811 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms