Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPTLC1O15269 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.24■□□□□ 0.67
SPTLC1O15269 AC125634.1-201ENST00000438758 1403 ntBASIC19.24■□□□□ 0.67
SPTLC1O15269 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.24■□□□□ 0.67
SPTLC1O15269 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SPTLC1O15269 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SPTLC1O15269 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.24■□□□□ 0.67
SPTLC1O15269 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPTLC1O15269 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SPTLC1O15269 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPTLC1O15269 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SPTLC1O15269 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
SPTLC1O15269 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.23■□□□□ 0.67
SPTLC1O15269 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SPTLC1O15269 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.23■□□□□ 0.67
SPTLC1O15269 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SPTLC1O15269 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.23■□□□□ 0.67
SPTLC1O15269 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SPTLC1O15269 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.23■□□□□ 0.67
SPTLC1O15269 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.23■□□□□ 0.67
SPTLC1O15269 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.23■□□□□ 0.67
SPTLC1O15269 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTLC1O15269 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SPTLC1O15269 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTLC1O15269 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTLC1O15269 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SPTLC1O15269 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTLC1O15269 AC020763.4-201ENST00000623414 4170 ntBASIC19.22■□□□□ 0.67
SPTLC1O15269 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.22■□□□□ 0.67
SPTLC1O15269 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SPTLC1O15269 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 RCN1P2-201ENST00000398357 915 ntBASIC19.22■□□□□ 0.67
SPTLC1O15269 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTLC1O15269 AC009078.2-202ENST00000463353 338 ntBASIC19.22■□□□□ 0.67
SPTLC1O15269 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.22■□□□□ 0.67
SPTLC1O15269 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTLC1O15269 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.22■□□□□ 0.67
SPTLC1O15269 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.22■□□□□ 0.67
SPTLC1O15269 AC096582.2-201ENST00000510860 516 ntBASIC19.22■□□□□ 0.67
SPTLC1O15269 DUTP2-201ENST00000519164 463 ntBASIC19.22■□□□□ 0.67
SPTLC1O15269 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.22■□□□□ 0.67
SPTLC1O15269 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.22■□□□□ 0.67
SPTLC1O15269 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.22■□□□□ 0.67
SPTLC1O15269 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTLC1O15269 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.22■□□□□ 0.67
SPTLC1O15269 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.22■□□□□ 0.67
SPTLC1O15269 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SPTLC1O15269 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.22■□□□□ 0.67
SPTLC1O15269 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTLC1O15269 TP73-AS1-210ENST00000637775 1455 ntBASIC19.22■□□□□ 0.67
SPTLC1O15269 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPTLC1O15269 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.21■□□□□ 0.67
SPTLC1O15269 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 KRT8P47-201ENST00000604727 1398 ntBASIC19.21■□□□□ 0.67
SPTLC1O15269 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPTLC1O15269 REXO1L9P-201ENST00000604264 2108 ntBASIC19.21■□□□□ 0.67
SPTLC1O15269 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 AKR1C7P-201ENST00000305623 895 ntBASIC19.21■□□□□ 0.67
SPTLC1O15269 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SPTLC1O15269 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.21■□□□□ 0.67
SPTLC1O15269 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 MIR5100-201ENST00000579544 119 ntBASIC19.21■□□□□ 0.67
SPTLC1O15269 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPTLC1O15269 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPTLC1O15269 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.21■□□□□ 0.67
SPTLC1O15269 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms