Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC285556D6RIA3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC285556D6RIA3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC285556D6RIA3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 AL513190.1-201ENST00000621254 727 ntBASIC20.45■□□□□ 0.86
LOC285556D6RIA3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 AC092865.6-201ENST00000642101 219 ntBASIC20.45■□□□□ 0.86
LOC285556D6RIA3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC285556D6RIA3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 IGLL3P-201ENST00000412472 434 ntBASIC20.44■□□□□ 0.86
LOC285556D6RIA3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 RPS15P9-201ENST00000494093 319 ntBASIC20.44■□□□□ 0.86
LOC285556D6RIA3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 AC003669.1-201ENST00000334569 611 ntBASIC20.44■□□□□ 0.86
LOC285556D6RIA3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.44■□□□□ 0.86
LOC285556D6RIA3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.44■□□□□ 0.86
LOC285556D6RIA3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 HTR5BP-201ENST00000430851 1154 ntBASIC20.43■□□□□ 0.86
LOC285556D6RIA3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LOC285556D6RIA3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 SLC25A24-204ENST00000569674 2357 ntBASIC20.42■□□□□ 0.86
LOC285556D6RIA3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 AL049757.1-201ENST00000616842 1596 ntBASIC20.42■□□□□ 0.86
LOC285556D6RIA3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.42■□□□□ 0.86
LOC285556D6RIA3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
LOC285556D6RIA3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LOC285556D6RIA3 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.41■□□□□ 0.86
LOC285556D6RIA3 MKNK2P1-201ENST00000437526 628 ntBASIC20.41■□□□□ 0.86
LOC285556D6RIA3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.41■□□□□ 0.86
LOC285556D6RIA3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LOC285556D6RIA3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
LOC285556D6RIA3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms