Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 AL671883.3-201ENST00000603274 991 ntBASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AL356309.3-201ENST00000624132 1934 ntBASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 FAM220CP-201ENST00000395253 831 ntBASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 SART3-203ENST00000546611 1184 ntBASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AC021087.4-201ENST00000563761 564 ntBASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3BA6NDS4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 RPL13AP23-201ENST00000480739 586 ntBASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 MIR7706-201ENST00000613747 67 ntBASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 AC117500.6-201ENST00000624871 588 ntBASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 AC097374.2-201ENST00000618617 1306 ntBASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TBC1D3BA6NDS4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms