Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 BX088651.1-201ENST00000540551 451 ntBASIC18.06■□□□□ 0.48
CCDC189A1A4V9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 FITM1-202ENST00000559294 800 ntBASIC18.06■□□□□ 0.48
CCDC189A1A4V9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 MIR4674-201ENST00000582457 87 ntBASIC18.06■□□□□ 0.48
CCDC189A1A4V9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 AC010653.2-201ENST00000623505 997 ntBASIC18.06■□□□□ 0.48
CCDC189A1A4V9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 RBM17P1-201ENST00000453646 1190 ntBASIC18.05■□□□□ 0.48
CCDC189A1A4V9 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 Z99916.2-201ENST00000604037 246 ntBASIC18.05■□□□□ 0.48
CCDC189A1A4V9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC189A1A4V9 AC011676.5-201ENST00000624864 2660 ntBASIC18.05■□□□□ 0.48
CCDC189A1A4V9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 NKILA-202ENST00000614771 2598 ntBASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AC116562.4-202ENST00000641738 218 ntBASIC18.04■□□□□ 0.48
CCDC189A1A4V9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms