Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL023875.1-201ENST00000640777 796 ntBASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV3S1A0A5B6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 CICP6-201ENST00000457191 2729 ntBASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 AC060834.1-201ENST00000443027 2032 ntBASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV3S1A0A5B6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 AC239809.2-201ENST00000415381 517 ntBASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 AC233263.1-201ENST00000578059 224 ntBASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 MIR5787-201ENST00000611784 55 ntBASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 REXO1L11P-201ENST00000620964 1927 ntBASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 FLJ38576-201ENST00000623820 2459 ntBASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV3S1A0A5B6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 AC011506.1-201ENST00000474329 610 ntBASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 AP002982.1-201ENST00000492365 877 ntBASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 AC133041.1-202ENST00000642053 222 ntBASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 AL031985.4-201ENST00000642138 673 ntBASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms