Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 AP002414.4-201ENST00000589764 1148 ntBASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 NPAP1P7-201ENST00000613027 823 ntBASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGC4Q9Y5F7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 AC092119.3-201ENST00000612618 583 ntBASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 AC138028.4-201ENST00000564984 1845 ntBASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGC4Q9Y5F7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 HTR7P1-202ENST00000624664 4411 ntBASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 DUTP2-201ENST00000519164 463 ntBASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGC4Q9Y5F7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 AC018470.1-201ENST00000624790 3129 ntBASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms