Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF1Q9Y548 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF1Q9Y548 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF1Q9Y548 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
YIPF1Q9Y548 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
YIPF1Q9Y548 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
YIPF1Q9Y548 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
YIPF1Q9Y548 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
YIPF1Q9Y548 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
YIPF1Q9Y548 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 AC010460.3-201ENST00000511359 1579 ntBASIC18.76■□□□□ 0.59
YIPF1Q9Y548 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF1Q9Y548 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 PMS2P1-201ENST00000431037 1228 ntBASIC18.75■□□□□ 0.59
YIPF1Q9Y548 RPS2P1-201ENST00000434010 821 ntBASIC18.75■□□□□ 0.59
YIPF1Q9Y548 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 DUTP2-201ENST00000519164 463 ntBASIC18.75■□□□□ 0.59
YIPF1Q9Y548 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 AC025062.2-201ENST00000605477 670 ntBASIC18.75■□□□□ 0.59
YIPF1Q9Y548 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 AP000867.4-201ENST00000641616 219 ntBASIC18.75■□□□□ 0.59
YIPF1Q9Y548 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF1Q9Y548 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 WIZP1-201ENST00000531444 2299 ntBASIC18.74■□□□□ 0.59
YIPF1Q9Y548 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 MIR574-201ENST00000385209 96 ntBASIC18.74■□□□□ 0.59
YIPF1Q9Y548 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms