Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTCBQ9Y3I0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 CNN2P11-201ENST00000429351 262 ntBASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 AC073592.5-201ENST00000624854 528 ntBASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTCBQ9Y3I0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 ELK2BP-201ENST00000415014 1224 ntBASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 AC103564.2-201ENST00000432853 1299 ntBASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 VN2R19P-201ENST00000442399 1052 ntBASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 AC018845.2-201ENST00000568326 409 ntBASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 MIR4751-201ENST00000578027 74 ntBASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 AC006504.4-201ENST00000592118 1568 ntBASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 KRT8P47-201ENST00000604727 1398 ntBASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTCBQ9Y3I0 AFG3L1P-217ENST00000557444 2447 ntBASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 AL645939.2-201ENST00000427340 991 ntBASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 GMCL1P1-201ENST00000463439 1581 ntBASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 AC108073.2-201ENST00000464002 357 ntBASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTCBQ9Y3I0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 AL020989.1-201ENST00000422979 469 ntBASIC22.6■■□□□ 1.21
RTCBQ9Y3I0 MKNK2P1-201ENST00000437526 628 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms