Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 NEFHP1-201ENST00000412845 2629 ntBASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RPH3AQ9Y2J0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 AC005332.3-201ENST00000589904 676 ntBASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 AL691432.3-201ENST00000621860 400 ntBASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 LINC01126-201ENST00000623515 1646 ntBASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 Z83836.1-201ENST00000624605 1642 ntBASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 AL024508.2-201ENST00000607749 1894 ntBASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPH3AQ9Y2J0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 GMCL1P1-201ENST00000463439 1581 ntBASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 ESPNP-201ENST00000270691 2015 ntBASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 BICD1-207ENST00000551848 1962 ntBASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 AC135050.7-201ENST00000624508 2218 ntBASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPH3AQ9Y2J0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPH3AQ9Y2J0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms