Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.3■□□□□ 0.2
RCE1Q9Y256 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 RASA4DP-201ENST00000460726 1199 ntBASIC16.3■□□□□ 0.2
RCE1Q9Y256 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 RN7SL850P-201ENST00000579959 291 ntBASIC16.3■□□□□ 0.2
RCE1Q9Y256 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCE1Q9Y256 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCE1Q9Y256 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 AC008687.5-201ENST00000593746 558 ntBASIC16.3■□□□□ 0.2
RCE1Q9Y256 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 AL157888.1-201ENST00000631930 593 ntBASIC16.3■□□□□ 0.2
RCE1Q9Y256 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCE1Q9Y256 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCE1Q9Y256 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCE1Q9Y256 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
RCE1Q9Y256 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 PVRIG2P-201ENST00000435460 978 ntBASIC16.29■□□□□ 0.2
RCE1Q9Y256 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 GMCL1P1-201ENST00000463439 1581 ntBASIC16.29■□□□□ 0.2
RCE1Q9Y256 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.29■□□□□ 0.2
RCE1Q9Y256 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCE1Q9Y256 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 LINC01238-205ENST00000567549 1107 ntBASIC16.28■□□□□ 0.2
RCE1Q9Y256 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 PKD1P1-201ENST00000458669 6805 ntBASIC16.28■□□□□ 0.2
RCE1Q9Y256 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCE1Q9Y256 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.28■□□□□ 0.2
RCE1Q9Y256 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCE1Q9Y256 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RCE1Q9Y256 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RCE1Q9Y256 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms