Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 MIR5100-201ENST00000579544 119 ntBASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 AL591684.3-201ENST00000605187 298 ntBASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 AC104581.1-202ENST00000635932 2618 ntBASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 RCN1P2-201ENST00000398357 915 ntBASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 FAAHP1-202ENST00000446499 1238 ntBASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
UBQLN1Q9UMX0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 AC097374.2-201ENST00000618617 1306 ntBASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 AC011467.2-201ENST00000598425 242 ntBASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 KRT8P47-201ENST00000604727 1398 ntBASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN1Q9UMX0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 REXO1L9P-201ENST00000604264 2108 ntBASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 AC020763.4-201ENST00000623414 4170 ntBASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 EMBP1-201ENST00000458200 901 ntBASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.27■□□□□ 0.68
UBQLN1Q9UMX0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms