Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 IGHV3-47-201ENST00000425060 335 ntBASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 DUSP5P1-201ENST00000441325 1139 ntBASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 DUTP2-201ENST00000519164 463 ntBASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 AC012615.1-201ENST00000565797 1299 ntBASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 Z69720.1-201ENST00000601483 472 ntBASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 AP000997.3-201ENST00000623333 2250 ntBASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 AC135050.7-201ENST00000624508 2218 ntBASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 ABALON-201ENST00000629058 1903 ntBASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.34■□□□□ 0.37
SPHK1Q9NYA1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.33■□□□□ 0.37
SPHK1Q9NYA1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 AC246785.2-201ENST00000432512 513 ntBASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 VENTXP7-201ENST00000475503 772 ntBASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 AC104819.1-201ENST00000504587 486 ntBASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 AC005336.2-201ENST00000593183 939 ntBASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPHK1Q9NYA1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms