Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRDM9Q9NQV7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 CHCHD2P8-201ENST00000429873 447 ntBASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 AC090616.6-201ENST00000582640 721 ntBASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 AC093458.2-201ENST00000623150 629 ntBASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
PRDM9Q9NQV7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 BCL2-203ENST00000589955 5011 ntBASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 GUSBP12-201ENST00000513727 720 ntBASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 AC009154.2-201ENST00000621177 724 ntBASIC17.02■□□□□ 0.32
PRDM9Q9NQV7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRDM9Q9NQV7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRDM9Q9NQV7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms