Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 REXO1L2P-201ENST00000425429 2069 ntBASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CYSTM1Q9H1C7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 RAP2CP1-202ENST00000605179 643 ntBASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 PTENP1-202ENST00000532280 3996 ntBASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 AC099521.3-201ENST00000624251 2938 ntBASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC10.42□□□□□ -0.74
CYSTM1Q9H1C7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 AL499627.2-201ENST00000606283 725 ntBASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms