Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF38Q9H0F5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 AP000347.1-202ENST00000435868 847 ntBASIC18.64■□□□□ 0.57
RNF38Q9H0F5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 AC004408.2-201ENST00000623613 2777 ntBASIC18.64■□□□□ 0.57
RNF38Q9H0F5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF38Q9H0F5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 AC093677.2-201ENST00000600169 1863 ntBASIC18.63■□□□□ 0.57
RNF38Q9H0F5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 AC008608.2-201ENST00000606089 416 ntBASIC18.63■□□□□ 0.57
RNF38Q9H0F5 AP001269.4-201ENST00000609611 512 ntBASIC18.63■□□□□ 0.57
RNF38Q9H0F5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 HLA-A-201ENST00000376802 1334 ntBASIC18.63■□□□□ 0.57
RNF38Q9H0F5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 AC135776.1-201ENST00000319817 2481 ntBASIC18.63■□□□□ 0.57
RNF38Q9H0F5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF38Q9H0F5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 AL096828.2-201ENST00000567259 1965 ntBASIC18.62■□□□□ 0.57
RNF38Q9H0F5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 FAM197Y8-203ENST00000450145 560 ntBASIC18.62■□□□□ 0.57
RNF38Q9H0F5 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF38Q9H0F5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 AL138781.2-201ENST00000617896 1843 ntBASIC18.61■□□□□ 0.57
RNF38Q9H0F5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms