Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 CHCHD2P8-201ENST00000429873 447 ntBASIC18.13■□□□□ 0.49
CLPBQ9H078 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPBQ9H078 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.13■□□□□ 0.49
CLPBQ9H078 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPBQ9H078 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.13■□□□□ 0.49
CLPBQ9H078 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.13■□□□□ 0.49
CLPBQ9H078 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLPBQ9H078 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPBQ9H078 MIR3652-201ENST00000579335 131 ntBASIC18.13■□□□□ 0.49
CLPBQ9H078 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.13■□□□□ 0.49
CLPBQ9H078 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CLPBQ9H078 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPBQ9H078 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPBQ9H078 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPBQ9H078 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPBQ9H078 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPBQ9H078 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLPBQ9H078 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPBQ9H078 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLPBQ9H078 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.12■□□□□ 0.49
CLPBQ9H078 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.12■□□□□ 0.49
CLPBQ9H078 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.12■□□□□ 0.49
CLPBQ9H078 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.12■□□□□ 0.49
CLPBQ9H078 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.12■□□□□ 0.49
CLPBQ9H078 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.12■□□□□ 0.49
CLPBQ9H078 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.12■□□□□ 0.49
CLPBQ9H078 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.12■□□□□ 0.49
CLPBQ9H078 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLPBQ9H078 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.12■□□□□ 0.49
CLPBQ9H078 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.12■□□□□ 0.49
CLPBQ9H078 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.12■□□□□ 0.49
CLPBQ9H078 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.12■□□□□ 0.49
CLPBQ9H078 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CLPBQ9H078 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.12■□□□□ 0.49
CLPBQ9H078 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLPBQ9H078 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.12■□□□□ 0.49
CLPBQ9H078 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLPBQ9H078 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.12■□□□□ 0.49
CLPBQ9H078 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLPBQ9H078 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLPBQ9H078 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.11■□□□□ 0.49
CLPBQ9H078 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.11■□□□□ 0.49
CLPBQ9H078 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPBQ9H078 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPBQ9H078 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.11■□□□□ 0.49
CLPBQ9H078 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLPBQ9H078 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.11■□□□□ 0.49
CLPBQ9H078 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPBQ9H078 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLPBQ9H078 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.11■□□□□ 0.49
CLPBQ9H078 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 Z83836.1-201ENST00000624605 1642 ntBASIC18.11■□□□□ 0.49
CLPBQ9H078 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPBQ9H078 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPBQ9H078 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPBQ9H078 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms