Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 AC211486.1-202ENST00000416371 468 ntBASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 AC211476.1-201ENST00000503899 468 ntBASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTFDC1Q9BY42 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 AL589182.2-201ENST00000619332 1049 ntBASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTFDC1Q9BY42 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTFDC1Q9BY42 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RTFDC1Q9BY42 AL031598.1-201ENST00000561511 1773 ntBASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 GMCL1P1-201ENST00000463439 1581 ntBASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms