Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 AC112907.2-201ENST00000448639 330 ntBASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CNPPD1Q9BV87 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 SDHAP2-201ENST00000455183 2001 ntBASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 FAM8A6P-201ENST00000407496 1135 ntBASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNPPD1Q9BV87 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 ABALON-201ENST00000629058 1903 ntBASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 AL136038.4-201ENST00000603606 1261 ntBASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNPPD1Q9BV87 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.11■□□□□ 0.33
CNPPD1Q9BV87 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms