Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.75■□□□□ 0.27
TM9SF2Q99805 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.75■□□□□ 0.27
TM9SF2Q99805 STARP1-201ENST00000397973 869 ntBASIC16.75■□□□□ 0.27
TM9SF2Q99805 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 AL671277.2-201ENST00000458060 996 ntBASIC16.75■□□□□ 0.27
TM9SF2Q99805 AC034232.1-201ENST00000506026 1064 ntBASIC16.75■□□□□ 0.27
TM9SF2Q99805 GCSHP2-201ENST00000560971 527 ntBASIC16.75■□□□□ 0.27
TM9SF2Q99805 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.75■□□□□ 0.27
TM9SF2Q99805 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF2Q99805 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.74■□□□□ 0.27
TM9SF2Q99805 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 LINC00896-202ENST00000609602 2128 ntBASIC16.74■□□□□ 0.27
TM9SF2Q99805 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 TNRC18P3-201ENST00000441896 2691 ntBASIC16.74■□□□□ 0.27
TM9SF2Q99805 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF2Q99805 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF2Q99805 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 AC036111.1-201ENST00000533973 1582 ntBASIC16.73■□□□□ 0.27
TM9SF2Q99805 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 AC134043.2-201ENST00000624206 2238 ntBASIC16.73■□□□□ 0.27
TM9SF2Q99805 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 AL358472.4-201ENST00000633140 710 ntBASIC16.73■□□□□ 0.27
TM9SF2Q99805 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms