Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
CNTNAP3BQ96NU0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 DUX4L27-201ENST00000554796 1261 ntBASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CNTNAP3BQ96NU0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 PGM5P2-202ENST00000637225 1043 ntBASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 AC092902.6-201ENST00000641783 218 ntBASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNTNAP3BQ96NU0 SMG8-203ENST00000578922 2178 ntBASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 HOXB1-202ENST00000577092 1414 ntBASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.16■□□□□ 0.34
CNTNAP3BQ96NU0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms