Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM11Q96F44 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM11Q96F44 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM11Q96F44 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.08■□□□□ 0.65
TRIM11Q96F44 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TRIM11Q96F44 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM11Q96F44 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM11Q96F44 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM11Q96F44 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM11Q96F44 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM11Q96F44 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM11Q96F44 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TRIM11Q96F44 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.08■□□□□ 0.65
TRIM11Q96F44 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM11Q96F44 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.08■□□□□ 0.64
TRIM11Q96F44 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 AC024563.2-201ENST00000603282 481 ntBASIC19.08■□□□□ 0.64
TRIM11Q96F44 AL023973.1-201ENST00000624619 620 ntBASIC19.08■□□□□ 0.64
TRIM11Q96F44 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 AC012317.2-201ENST00000623305 2251 ntBASIC19.08■□□□□ 0.64
TRIM11Q96F44 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM11Q96F44 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRIM11Q96F44 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.07■□□□□ 0.64
TRIM11Q96F44 RASA4DP-201ENST00000460726 1199 ntBASIC19.07■□□□□ 0.64
TRIM11Q96F44 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 COX11P1-201ENST00000489116 835 ntBASIC19.07■□□□□ 0.64
TRIM11Q96F44 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM11Q96F44 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRIM11Q96F44 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.06■□□□□ 0.64
TRIM11Q96F44 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 AC116407.2-201ENST00000613639 860 ntBASIC19.06■□□□□ 0.64
TRIM11Q96F44 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM11Q96F44 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms