Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF428Q96B54 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF428Q96B54 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF428Q96B54 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.16■■□□□ 1.3
ZNF428Q96B54 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF428Q96B54 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.16■■□□□ 1.3
ZNF428Q96B54 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF428Q96B54 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF428Q96B54 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF428Q96B54 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF428Q96B54 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF428Q96B54 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
ZNF428Q96B54 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF428Q96B54 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.14■■□□□ 1.3
ZNF428Q96B54 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF428Q96B54 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC23.14■■□□□ 1.3
ZNF428Q96B54 AC020763.4-201ENST00000623414 4170 ntBASIC23.14■■□□□ 1.3
ZNF428Q96B54 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC23.14■■□□□ 1.3
ZNF428Q96B54 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
ZNF428Q96B54 NOC2LP2-201ENST00000407594 1944 ntBASIC23.14■■□□□ 1.3
ZNF428Q96B54 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF428Q96B54 AC008764.6-201ENST00000595909 2069 ntBASIC23.14■■□□□ 1.29
ZNF428Q96B54 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF428Q96B54 DRAXINP1-201ENST00000437611 948 ntBASIC23.14■■□□□ 1.29
ZNF428Q96B54 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.14■■□□□ 1.29
ZNF428Q96B54 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.14■■□□□ 1.29
ZNF428Q96B54 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.14■■□□□ 1.29
ZNF428Q96B54 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF428Q96B54 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF428Q96B54 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF428Q96B54 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF428Q96B54 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
ZNF428Q96B54 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF428Q96B54 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF428Q96B54 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
ZNF428Q96B54 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 AL353801.3-201ENST00000609898 542 ntBASIC23.13■■□□□ 1.29
ZNF428Q96B54 AL592071.1-201ENST00000611956 408 ntBASIC23.13■■□□□ 1.29
ZNF428Q96B54 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF428Q96B54 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC23.13■■□□□ 1.29
ZNF428Q96B54 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 AC079781.3-201ENST00000449110 356 ntBASIC23.12■■□□□ 1.29
ZNF428Q96B54 AC009078.2-202ENST00000463353 338 ntBASIC23.12■■□□□ 1.29
ZNF428Q96B54 RN7SL606P-201ENST00000472779 293 ntBASIC23.12■■□□□ 1.29
ZNF428Q96B54 AC068472.1-201ENST00000474589 881 ntBASIC23.12■■□□□ 1.29
ZNF428Q96B54 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC23.12■■□□□ 1.29
ZNF428Q96B54 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF428Q96B54 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms