Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.13■■□□□ 1.13
RPGRQ92834 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RPGRQ92834 AC010460.3-201ENST00000511359 1579 ntBASIC22.12■■□□□ 1.13
RPGRQ92834 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.12■■□□□ 1.13
RPGRQ92834 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.12■■□□□ 1.13
RPGRQ92834 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.12■■□□□ 1.13
RPGRQ92834 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 AC116562.4-201ENST00000641316 2276 ntBASIC22.12■■□□□ 1.13
RPGRQ92834 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.12■■□□□ 1.13
RPGRQ92834 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RPGRQ92834 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.12■■□□□ 1.13
RPGRQ92834 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
RPGRQ92834 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.12■■□□□ 1.13
RPGRQ92834 AC122714.2-201ENST00000502787 707 ntBASIC22.12■■□□□ 1.13
RPGRQ92834 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.12■■□□□ 1.13
RPGRQ92834 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.12■■□□□ 1.13
RPGRQ92834 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.12■■□□□ 1.13
RPGRQ92834 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.12■■□□□ 1.13
RPGRQ92834 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.12■■□□□ 1.13
RPGRQ92834 AC073592.4-201ENST00000623827 446 ntBASIC22.12■■□□□ 1.13
RPGRQ92834 PGM5P2-202ENST00000637225 1043 ntBASIC22.12■■□□□ 1.13
RPGRQ92834 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RPGRQ92834 AC134684.3-201ENST00000641758 218 ntBASIC22.12■■□□□ 1.13
RPGRQ92834 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPGRQ92834 AC004817.3-201ENST00000602957 2129 ntBASIC22.12■■□□□ 1.13
RPGRQ92834 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RPGRQ92834 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RPGRQ92834 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.11■■□□□ 1.13
RPGRQ92834 AC096633.1-201ENST00000422446 749 ntBASIC22.11■■□□□ 1.13
RPGRQ92834 KRT18P27-201ENST00000427733 1299 ntBASIC22.11■■□□□ 1.13
RPGRQ92834 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.11■■□□□ 1.13
RPGRQ92834 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.11■■□□□ 1.13
RPGRQ92834 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.11■■□□□ 1.13
RPGRQ92834 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.11■■□□□ 1.13
RPGRQ92834 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
RPGRQ92834 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.11■■□□□ 1.13
RPGRQ92834 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RPGRQ92834 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.1■■□□□ 1.13
RPGRQ92834 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RPGRQ92834 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RPGRQ92834 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
RPGRQ92834 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 ESPNP-201ENST00000270691 2015 ntBASIC22.1■■□□□ 1.13
RPGRQ92834 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.1■■□□□ 1.13
RPGRQ92834 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RPGRQ92834 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.1■■□□□ 1.13
RPGRQ92834 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.1■■□□□ 1.13
RPGRQ92834 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.1■■□□□ 1.13
RPGRQ92834 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.1■■□□□ 1.13
RPGRQ92834 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.1■■□□□ 1.13
RPGRQ92834 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.1■■□□□ 1.13
RPGRQ92834 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 AC064836.3-201ENST00000607928 673 ntBASIC22.1■■□□□ 1.13
RPGRQ92834 AD001527.2-201ENST00000622994 785 ntBASIC22.1■■□□□ 1.13
RPGRQ92834 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.1■■□□□ 1.13
RPGRQ92834 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
RPGRQ92834 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RPGRQ92834 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RPGRQ92834 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
RPGRQ92834 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RPGRQ92834 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.09■■□□□ 1.13
RPGRQ92834 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RPGRQ92834 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.09■■□□□ 1.13
RPGRQ92834 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RPGRQ92834 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.09■■□□□ 1.13
RPGRQ92834 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms