Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 AL596275.1-201ENST00000423464 877 ntBASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 AL390955.1-201ENST00000428694 934 ntBASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 SLC25A1P2-201ENST00000430693 912 ntBASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTN4IP1Q8WWV3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.21■□□□□ 0.02
RTN4IP1Q8WWV3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTN4IP1Q8WWV3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTN4IP1Q8WWV3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTN4IP1Q8WWV3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTN4IP1Q8WWV3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 AC008622.2-201ENST00000617006 1229 ntBASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.2■□□□□ 0.02
RTN4IP1Q8WWV3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 AC080080.1-201ENST00000625121 2420 ntBASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 AL109659.2-201ENST00000606809 1674 ntBASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 PHGDH-209ENST00000641074 1780 ntBASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 AP000593.1-201ENST00000393668 712 ntBASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 CCR12P-201ENST00000446203 998 ntBASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 C2orf69P3-201ENST00000565542 1120 ntBASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.19■□□□□ 0.02
RTN4IP1Q8WWV3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
RTN4IP1Q8WWV3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms