Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 TSPY6P-201ENST00000448518 926 ntBASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 MTDHP1-201ENST00000605323 784 ntBASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 GPAT2P1-201ENST00000444924 1672 ntBASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 CICP6-201ENST00000457191 2729 ntBASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 NCF1B-203ENST00000435988 1254 ntBASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 AC008040.2-201ENST00000461049 708 ntBASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CKAP2Q8WWK9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 NIFKP9-201ENST00000419265 221 ntBASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 AL109923.1-201ENST00000618799 583 ntBASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CKAP2Q8WWK9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms