Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC009154.2-201ENST00000621177 724 ntBASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC148Q8NFR7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 KRT8P26-201ENST00000534154 1276 ntBASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 AC091076.1-201ENST00000610741 619 ntBASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC148Q8NFR7 AC022898.2-201ENST00000616822 1312 ntBASIC20.77■□□□□ 0.91
CCDC148Q8NFR7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC148Q8NFR7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
CCDC148Q8NFR7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
CCDC148Q8NFR7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC148Q8NFR7 AC005332.8-201ENST00000622750 2735 ntBASIC20.77■□□□□ 0.91
CCDC148Q8NFR7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 AC138028.4-201ENST00000564984 1845 ntBASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 AL121672.3-201ENST00000608644 468 ntBASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 AL358472.4-201ENST00000633140 710 ntBASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC148Q8NFR7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms