Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NUP35Q8NFH5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 PCDHA1-201ENST00000378133 2726 ntBASIC13.48□□□□□ -0.25
NUP35Q8NFH5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 BX276092.2-201ENST00000417668 665 ntBASIC13.48□□□□□ -0.25
NUP35Q8NFH5 ZNRF2P3-201ENST00000424200 374 ntBASIC13.48□□□□□ -0.25
NUP35Q8NFH5 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.48□□□□□ -0.25
NUP35Q8NFH5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 AL596257.1-201ENST00000641463 2694 ntBASIC13.48□□□□□ -0.25
NUP35Q8NFH5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP35Q8NFH5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.47□□□□□ -0.25
NUP35Q8NFH5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms