Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PAF1Q8N7H5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PAF1Q8N7H5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PAF1Q8N7H5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.52■□□□□ 0.56
PAF1Q8N7H5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PAF1Q8N7H5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PAF1Q8N7H5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PAF1Q8N7H5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PAF1Q8N7H5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PAF1Q8N7H5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PAF1Q8N7H5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PAF1Q8N7H5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PAF1Q8N7H5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PAF1Q8N7H5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 AL031133.1-201ENST00000406807 723 ntBASIC18.51■□□□□ 0.55
PAF1Q8N7H5 PVRIG2P-201ENST00000435460 978 ntBASIC18.51■□□□□ 0.55
PAF1Q8N7H5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PAF1Q8N7H5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 HBZP1-201ENST00000354915 429 ntBASIC18.5■□□□□ 0.55
PAF1Q8N7H5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 KRT18P48-201ENST00000434763 852 ntBASIC18.5■□□□□ 0.55
PAF1Q8N7H5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 AL121956.5-201ENST00000625261 221 ntBASIC18.5■□□□□ 0.55
PAF1Q8N7H5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC18.5■□□□□ 0.55
PAF1Q8N7H5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 AL645929.1-201ENST00000420084 975 ntBASIC18.49■□□□□ 0.55
PAF1Q8N7H5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.49■□□□□ 0.55
PAF1Q8N7H5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms