Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 AC027601.4-201ENST00000611259 610 ntBASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 AC108751.1-201ENST00000490852 363 ntBASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 AC004817.3-201ENST00000602957 2129 ntBASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 DDX43P3-201ENST00000441064 443 ntBASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC24.8■■□□□ 1.56
ARHGEF28Q8N1W1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 AC136632.2-201ENST00000512891 861 ntBASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ARHGEF28Q8N1W1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 YBX2P1-201ENST00000394192 760 ntBASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 AC108073.2-201ENST00000464002 357 ntBASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 AC022898.2-201ENST00000616822 1312 ntBASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 AC009949.1-201ENST00000623048 1830 ntBASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
ARHGEF28Q8N1W1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
ARHGEF28Q8N1W1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms