Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.3■■□□□ 1.16
SMC5Q8IY18 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 AC004263.2-201ENST00000617183 678 ntBASIC22.3■■□□□ 1.16
SMC5Q8IY18 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SMC5Q8IY18 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.29■■□□□ 1.16
SMC5Q8IY18 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.29■■□□□ 1.16
SMC5Q8IY18 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.29■■□□□ 1.16
SMC5Q8IY18 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.29■■□□□ 1.16
SMC5Q8IY18 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 AL137013.1-201ENST00000432946 1228 ntBASIC22.29■■□□□ 1.16
SMC5Q8IY18 ATP5G1P1-201ENST00000448724 379 ntBASIC22.29■■□□□ 1.16
SMC5Q8IY18 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SMC5Q8IY18 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMC5Q8IY18 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 KRT18P38-201ENST00000449496 1282 ntBASIC22.28■■□□□ 1.16
SMC5Q8IY18 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.28■■□□□ 1.16
SMC5Q8IY18 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMC5Q8IY18 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMC5Q8IY18 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMC5Q8IY18 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMC5Q8IY18 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 MIR662-201ENST00000384847 95 ntBASIC22.27■■□□□ 1.16
SMC5Q8IY18 AC005521.1-201ENST00000393351 872 ntBASIC22.27■■□□□ 1.16
SMC5Q8IY18 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMC5Q8IY18 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMC5Q8IY18 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 HYMAI.1-201ENST00000620949 238 ntBASIC22.27■■□□□ 1.16
SMC5Q8IY18 AL138688.1-201ENST00000624851 1594 ntBASIC22.27■■□□□ 1.16
SMC5Q8IY18 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SMC5Q8IY18 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMC5Q8IY18 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMC5Q8IY18 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SMC5Q8IY18 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SMC5Q8IY18 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.26■■□□□ 1.15
SMC5Q8IY18 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.26■■□□□ 1.15
SMC5Q8IY18 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.26■■□□□ 1.15
SMC5Q8IY18 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.26■■□□□ 1.15
SMC5Q8IY18 AC009154.2-201ENST00000621177 724 ntBASIC22.26■■□□□ 1.15
SMC5Q8IY18 AC006011.2-201ENST00000621313 1158 ntBASIC22.26■■□□□ 1.15
SMC5Q8IY18 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.26■■□□□ 1.15
SMC5Q8IY18 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SMC5Q8IY18 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMC5Q8IY18 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms