Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 AC139713.2-201ENST00000641328 2723 ntBASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC83Q8IWF9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 AC141257.4-201ENST00000634557 245 ntBASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 AC136944.6-201ENST00000634818 245 ntBASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 AC066615.1-201ENST00000640911 628 ntBASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 LINC00167-201ENST00000530583 1419 ntBASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC83Q8IWF9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 AC087499.1-201ENST00000418141 1075 ntBASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 DUTP2-201ENST00000519164 463 ntBASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 GCSHP2-201ENST00000560971 527 ntBASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 KRT18P22-201ENST00000402024 1347 ntBASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 AC106820.2-201ENST00000563775 3264 ntBASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC83Q8IWF9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 PVRIG2P-201ENST00000435460 978 ntBASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 AL645608.8-201ENST00000606034 2086 ntBASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 LINC00602-201ENST00000629776 2065 ntBASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC83Q8IWF9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC83Q8IWF9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC83Q8IWF9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CCDC83Q8IWF9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms