Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.9■□□□□ 0.46
APLFQ8IW19 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.9■□□□□ 0.46
APLFQ8IW19 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.9■□□□□ 0.46
APLFQ8IW19 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.9■□□□□ 0.46
APLFQ8IW19 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
APLFQ8IW19 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APLFQ8IW19 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.89■□□□□ 0.46
APLFQ8IW19 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.89■□□□□ 0.46
APLFQ8IW19 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
APLFQ8IW19 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.89■□□□□ 0.46
APLFQ8IW19 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
APLFQ8IW19 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
APLFQ8IW19 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.89■□□□□ 0.46
APLFQ8IW19 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.89■□□□□ 0.45
APLFQ8IW19 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
APLFQ8IW19 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.89■□□□□ 0.45
APLFQ8IW19 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
APLFQ8IW19 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
APLFQ8IW19 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
APLFQ8IW19 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.89■□□□□ 0.45
APLFQ8IW19 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.89■□□□□ 0.45
APLFQ8IW19 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.89■□□□□ 0.45
APLFQ8IW19 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 FAM86EP-206ENST00000510506 987 ntBASIC17.89■□□□□ 0.45
APLFQ8IW19 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.89■□□□□ 0.45
APLFQ8IW19 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.89■□□□□ 0.45
APLFQ8IW19 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.89■□□□□ 0.45
APLFQ8IW19 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.89■□□□□ 0.45
APLFQ8IW19 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.89■□□□□ 0.45
APLFQ8IW19 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.89■□□□□ 0.45
APLFQ8IW19 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.89■□□□□ 0.45
APLFQ8IW19 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
APLFQ8IW19 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
APLFQ8IW19 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.89■□□□□ 0.45
APLFQ8IW19 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
APLFQ8IW19 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
APLFQ8IW19 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.89■□□□□ 0.45
APLFQ8IW19 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APLFQ8IW19 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
APLFQ8IW19 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
APLFQ8IW19 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
APLFQ8IW19 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.88■□□□□ 0.45
APLFQ8IW19 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 AL596257.1-201ENST00000641463 2694 ntBASIC17.88■□□□□ 0.45
APLFQ8IW19 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
APLFQ8IW19 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
APLFQ8IW19 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.88■□□□□ 0.45
APLFQ8IW19 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.88■□□□□ 0.45
APLFQ8IW19 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.88■□□□□ 0.45
APLFQ8IW19 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 PCED1CP-201ENST00000419887 785 ntBASIC17.88■□□□□ 0.45
APLFQ8IW19 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.88■□□□□ 0.45
APLFQ8IW19 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.88■□□□□ 0.45
APLFQ8IW19 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 AC140113.3-201ENST00000605663 199 ntBASIC17.88■□□□□ 0.45
APLFQ8IW19 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
APLFQ8IW19 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
APLFQ8IW19 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.88■□□□□ 0.45
APLFQ8IW19 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
APLFQ8IW19 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms