Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ATP5B-203ENST00000547808 705 ntTSL 519.59■□□□□ 0.731e-13■□□□□ 9.3
SND1Q7KZF4 ATP5B-207ENST00000551020 856 ntTSL 319.53■□□□□ 0.722e-13■□□□□ 9.3
SND1Q7KZF4 ATP5B-210ENST00000552959 1085 ntTSL 319.38■□□□□ 0.692e-13■□□□□ 9.3
SND1Q7KZF4 CERS4-215ENST00000599275 710 ntTSL 218.75■□□□□ 0.598e-10■□□□□ 9.3
SND1Q7KZF4 TEX264-208ENST00000444233 873 ntAPPRIS ALT2 TSL 318.6■□□□□ 0.578e-10■□□□□ 9.3
SND1Q7KZF4 CERS4-202ENST00000557925 2401 ntTSL 517.29■□□□□ 0.368e-10■□□□□ 9.3
SND1Q7KZF4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.241e-13■□□□□ 9.3
SND1Q7KZF4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.22■□□□□ 0.193e-7■□□□□ 9.3
SND1Q7KZF4 COLGALT1-202ENST00000593832 2941 ntTSL 215.84■□□□□ 0.139e-6■□□□□ 9.3
SND1Q7KZF4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.66■□□□□ 0.13e-7■□□□□ 9.3
SND1Q7KZF4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.36■□□□□ 0.058e-10■□□□□ 9.3
SND1Q7KZF4 DERL2-212ENST00000575605 551 ntTSL 415.36■□□□□ 0.058e-10■□□□□ 9.3
SND1Q7KZF4 TEX264-206ENST00000419358 531 ntAPPRIS ALT2 TSL 215.11■□□□□ 0.018e-10■□□□□ 9.3
SND1Q7KZF4 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -01e-6■□□□□ 9.3
SND1Q7KZF4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.86□□□□□ -0.039e-6■□□□□ 9.3
SND1Q7KZF4 TEX264-207ENST00000425781 583 ntAPPRIS ALT2 TSL 314.85□□□□□ -0.038e-10■□□□□ 9.3
SND1Q7KZF4 TEX264-203ENST00000412249 596 ntAPPRIS ALT2 TSL 214.73□□□□□ -0.058e-10■□□□□ 9.3
SND1Q7KZF4 ARSB-203ENST00000521011 612 ntTSL 314.7□□□□□ -0.069e-6■□□□□ 9.3
SND1Q7KZF4 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC14.05□□□□□ -0.169e-6■□□□□ 9.3
SND1Q7KZF4 TMEM106A-205ENST00000588693 913 ntTSL 514.05□□□□□ -0.169e-6■□□□□ 9.3
SND1Q7KZF4 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.04□□□□□ -0.169e-6■□□□□ 9.3
SND1Q7KZF4 DERL2-207ENST00000573547 701 ntTSL 213.85□□□□□ -0.198e-10■□□□□ 9.3
SND1Q7KZF4 ATP5B-206ENST00000550162 863 ntTSL 213.7□□□□□ -0.221e-19■□□□□ 9.3
SND1Q7KZF4 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC13.47□□□□□ -0.259e-6■□□□□ 9.3
SND1Q7KZF4 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.289e-6■□□□□ 9.3
SND1Q7KZF4 MFSD11-205ENST00000585865 857 ntTSL 513.31□□□□□ -0.289e-6■□□□□ 9.3
SND1Q7KZF4 TMX2-203ENST00000524972 696 ntTSL 312.33□□□□□ -0.445e-6■□□□□ 9.3
SND1Q7KZF4 DERL2-206ENST00000572834 589 ntTSL 3 BASIC12.11□□□□□ -0.478e-10■□□□□ 9.3
SND1Q7KZF4 SUMF2-215ENST00000461912 529 ntTSL 411.01□□□□□ -0.658e-10■□□□□ 9.3
SND1Q7KZF4 DERL2-201ENST00000158771 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.658e-10■□□□□ 9.3
SND1Q7KZF4 MFSD11-212ENST00000588647 845 ntTSL 410.97□□□□□ -0.659e-6■□□□□ 9.3
SND1Q7KZF4 UXS1-209ENST00000470053 377 ntTSL 210.71□□□□□ -0.699e-6■□□□□ 9.3
SND1Q7KZF4 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.759e-6■□□□□ 9.3
SND1Q7KZF4 MFSD11-204ENST00000585692 964 ntTSL 59.73□□□□□ -0.859e-6■□□□□ 9.3
SND1Q7KZF4 ATP5B-202ENST00000547250 840 ntTSL 59.72□□□□□ -0.856e-20■□□□□ 9.3
SND1Q7KZF4 MPZL1-202ENST00000367853 881 ntTSL 1 (best)9.24□□□□□ -0.933e-7■□□□□ 9.3
SND1Q7KZF4 MPZL1-208ENST00000474729 1335 ntTSL 1 (best)8.85□□□□□ -0.993e-7■□□□□ 9.3
SND1Q7KZF4 ATP5B-209ENST00000551570 399 ntTSL 38.52□□□□□ -1.051e-19■□□□□ 9.3
SND1Q7KZF4 MPZL1-211ENST00000498279 534 ntTSL 47.96□□□□□ -1.149e-6■□□□□ 9.3
SND1Q7KZF4 TEX264-212ENST00000483429 322 ntTSL 37.86□□□□□ -1.158e-10■□□□□ 9.3
SND1Q7KZF4 TMX2-204ENST00000525035 703 ntTSL 37.52□□□□□ -1.215e-6■□□□□ 9.3
SND1Q7KZF4 UXS1-215ENST00000497604 2907 ntTSL 27.51□□□□□ -1.219e-6■□□□□ 9.3
SND1Q7KZF4 MFSD11-206ENST00000585958 575 ntTSL 47.05□□□□□ -1.289e-6■□□□□ 9.3
SND1Q7KZF4 MFSD11-215ENST00000590070 717 ntTSL 36.56□□□□□ -1.369e-6■□□□□ 9.3
SND1Q7KZF4 ATP5B-204ENST00000548474 449 ntTSL 36.47□□□□□ -1.371e-13■□□□□ 9.3
SND1Q7KZF4 MPZL1-204ENST00000403379 961 ntTSL 56.11□□□□□ -1.431e-6■□□□□ 9.3
SND1Q7KZF4 DERL2-203ENST00000571476 570 ntTSL 34.98□□□□□ -1.618e-10■□□□□ 9.3
SND1Q7KZF4 TUBA1B-201ENST00000332858 3198 ntTSL 1 (best)14.78□□□□□ -0.043e-24■□□□□ 9.3
SND1Q7KZF4 TUBA1B-204ENST00000547765 1875 ntTSL 514.63□□□□□ -0.073e-24■□□□□ 9.3
SND1Q7KZF4 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.123e-24■□□□□ 9.3
SND1Q7KZF4 TUBA1B-205ENST00000549870 565 ntTSL 413.58□□□□□ -0.243e-24■□□□□ 9.3
SND1Q7KZF4 TUBA1B-207ENST00000551324 840 ntTSL 210.22□□□□□ -0.773e-24■□□□□ 9.3
SND1Q7KZF4 TUBA1B-206ENST00000550367 835 ntTSL 39.94□□□□□ -0.823e-24■□□□□ 9.3
SND1Q7KZF4 NOTUM-202ENST00000425009 996 ntTSL 325.01■■□□□ 1.596e-43■□□□□ 9.3
SND1Q7KZF4 ITIH3-208ENST00000475931 558 ntTSL 316.27■□□□□ 0.29e-20■□□□□ 9.3
SND1Q7KZF4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.831e-8■□□□□ 9.3
SND1Q7KZF4 ATP5D-203ENST00000588538 1393 ntTSL 1 (best)19.72■□□□□ 0.751e-8■□□□□ 9.3
SND1Q7KZF4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.691e-8■□□□□ 9.3
SND1Q7KZF4 ATP5D-205ENST00000590265 1144 ntTSL 1 (best)19.36■□□□□ 0.691e-8■□□□□ 9.3
SND1Q7KZF4 ATP5D-206ENST00000591249 405 ntTSL 517.12■□□□□ 0.331e-8■□□□□ 9.3
SND1Q7KZF4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.121e-8■□□□□ 9.3
SND1Q7KZF4 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.11e-6■□□□□ 9.3
SND1Q7KZF4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.16□□□□□ -0.141e-6■□□□□ 9.3
SND1Q7KZF4 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC13.13□□□□□ -0.311e-6■□□□□ 9.3
SND1Q7KZF4 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.816e-8■□□□□ 9.3
SND1Q7KZF4 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.171e-6■□□□□ 9.3
SND1Q7KZF4 SCARB2-224ENST00000640880 554 ntTSL 411.03□□□□□ -0.645e-6■□□□□ 9.3
SND1Q7KZF4 SCARB2-225ENST00000640900 531 ntTSL 29.44□□□□□ -0.95e-6■□□□□ 9.3
SND1Q7KZF4 SCARB2-205ENST00000511129 860 ntTSL 27.63□□□□□ -1.195e-6■□□□□ 9.3
SND1Q7KZF4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9.25□□□□□ -0.932e-6■□□□□ 9.3
SND1Q7KZF4 KPNA2-206ENST00000583392 507 ntTSL 26.69□□□□□ -1.342e-8■□□□□ 9.3
SND1Q7KZF4 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.71□□□□□ -0.215e-17■□□□□ 9.3
SND1Q7KZF4 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.655e-17■□□□□ 9.3
SND1Q7KZF4 HIST1H2BJ-202ENST00000606923 408 ntTSL 37.27□□□□□ -1.255e-17■□□□□ 9.3
SND1Q7KZF4 CPD-207ENST00000584050 394 ntTSL 37.2□□□□□ -1.269e-8■□□□□ 9.3
SND1Q7KZF4 AC092073.1-201ENST00000592740 625 ntAPPRIS P1 TSL 318.02■□□□□ 0.485e-14■□□□□ 9.3
SND1Q7KZF4 GPI-203ENST00000586077 3053 nt12.07□□□□□ -0.485e-14■□□□□ 9.3
SND1Q7KZF4 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.98□□□□□ -0.173e-6■□□□□ 9.3
SND1Q7KZF4 VEGFA-217ENST00000518538 535 ntTSL 222.8■■□□□ 1.247e-20■□□□□ 9.3
SND1Q7KZF4 VEGFA-216ENST00000512683 475 ntTSL 1 (best)13.01□□□□□ -0.337e-20■□□□□ 9.3
SND1Q7KZF4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.66■□□□□ 0.98e-10■□□□□ 9.3
SND1Q7KZF4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.48e-10■□□□□ 9.3
SND1Q7KZF4 TRA2B-214ENST00000487615 4485 ntTSL 1 (best)12.99□□□□□ -0.338e-10■□□□□ 9.3
SND1Q7KZF4 TRA2B-206ENST00000456380 1697 ntTSL 512.81□□□□□ -0.368e-10■□□□□ 9.3
SND1Q7KZF4 TRA2B-208ENST00000465245 634 ntTSL 312.49□□□□□ -0.418e-10■□□□□ 9.3
SND1Q7KZF4 TRA2B-207ENST00000463328 2780 ntTSL 27.11□□□□□ -1.278e-10■□□□□ 9.3
SND1Q7KZF4 TRA2B-215ENST00000492417 4141 ntTSL 1 (best)4.76□□□□□ -1.658e-10■□□□□ 9.3
SND1Q7KZF4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.941e-12■□□□□ 9.3
SND1Q7KZF4 SSC4D-202ENST00000492979 1224 ntTSL 519.46■□□□□ 0.711e-12■□□□□ 9.3
SND1Q7KZF4 MPZL1-207ENST00000465787 1305 ntTSL 1 (best)25.37■■□□□ 1.656e-8■□□□□ 9.3
SND1Q7KZF4 POR-221ENST00000487247 853 ntTSL 214.83□□□□□ -0.042e-17■□□□□ 9.3
SND1Q7KZF4 ACSM3-205ENST00000561584 561 ntTSL 412.12□□□□□ -0.474e-11■□□□□ 9.3
SND1Q7KZF4 ACTN4-208ENST00000497637 877 ntTSL 220.55■□□□□ 0.888e-20■□□□□ 9.3
SND1Q7KZF4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.44■□□□□ 0.78e-20■□□□□ 9.3
SND1Q7KZF4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.568e-20■□□□□ 9.3
SND1Q7KZF4 ACTN4-211ENST00000589528 441 ntTSL 215.8■□□□□ 0.128e-20■□□□□ 9.3
SND1Q7KZF4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.95□□□□□ -0.028e-20■□□□□ 9.3
SND1Q7KZF4 ACTN4-205ENST00000477174 544 ntTSL 313.92□□□□□ -0.188e-20■□□□□ 9.3
SND1Q7KZF4 ACTN4-204ENST00000440400 3180 ntTSL 513.89□□□□□ -0.198e-20■□□□□ 9.3
SND1Q7KZF4 POR-224ENST00000496888 939 ntTSL 217.54■□□□□ 0.42e-17■□□□□ 9.2
Retrieved 100 of 13,567 protein–RNA pairs in 534.7 ms