RNA–Protein interactions for RNA: ENST00000584050.6

CPD-207, Transcript of carboxypeptidase D, humanhuman

TSL 3

Gene CPD, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-207ENST00000584050 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
CPD-207ENST00000584050 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
CPD-207ENST00000584050 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
CPD-207ENST00000584050 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
CPD-207ENST00000584050 FOXD1Q16676 465 aa18.44■□□□□ 0.54
CPD-207ENST00000584050 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
CPD-207ENST00000584050 MSH5O43196 834 aa17.23■□□□□ 0.35
CPD-207ENST00000584050 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
CPD-207ENST00000584050 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
CPD-207ENST00000584050 ADRA2BP18089 450 aa17.11■□□□□ 0.33
CPD-207ENST00000584050 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
CPD-207ENST00000584050 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
CPD-207ENST00000584050 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
CPD-207ENST00000584050 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
CPD-207ENST00000584050 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
CPD-207ENST00000584050 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
CPD-207ENST00000584050 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
CPD-207ENST00000584050 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
CPD-207ENST00000584050 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
CPD-207ENST00000584050 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
CPD-207ENST00000584050 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
CPD-207ENST00000584050 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
CPD-207ENST00000584050 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
CPD-207ENST00000584050 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
CPD-207ENST00000584050 DNAJC5BQ9UF47 199 aa14.41□□□□□ -0.1
CPD-207ENST00000584050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
CPD-207ENST00000584050 KCNA4P22459 653 aa14.05□□□□□ -0.16
CPD-207ENST00000584050 U3KPZ7 1027 aaPredicted RBP14.01□□□□□ -0.17
CPD-207ENST00000584050 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
CPD-207ENST00000584050 CAPN15O75808 1086 aa13.82□□□□□ -0.2
CPD-207ENST00000584050 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
CPD-207ENST00000584050 DSG3P32926 999 aa13.76□□□□□ -0.21
CPD-207ENST00000584050 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
CPD-207ENST00000584050 ABCB7O75027 752 aa13.53□□□□□ -0.24
CPD-207ENST00000584050 APLP2Q06481 763 aa13.48□□□□□ -0.25
CPD-207ENST00000584050 ZNF219Q9P2Y4 722 aaPredicted RBP13.48□□□□□ -0.25
CPD-207ENST00000584050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
CPD-207ENST00000584050 HNRNPUL2Q1KMD3 747 aaKnown RBP13.45□□□□□ -0.26
CPD-207ENST00000584050 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
CPD-207ENST00000584050 POTEHQ6S545 545 aa13.37□□□□□ -0.27
CPD-207ENST00000584050 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
CPD-207ENST00000584050 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
CPD-207ENST00000584050 POLA2Q14181 598 aa13.17□□□□□ -0.3
CPD-207ENST00000584050 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
CPD-207ENST00000584050 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
CPD-207ENST00000584050 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
CPD-207ENST00000584050 ZBTB22O15209 634 aa12.95□□□□□ -0.34
CPD-207ENST00000584050 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
CPD-207ENST00000584050 ZBTB12Q9Y330 459 aaPredicted RBP12.81□□□□□ -0.36
CPD-207ENST00000584050 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
CPD-207ENST00000584050 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
CPD-207ENST00000584050 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
CPD-207ENST00000584050 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
CPD-207ENST00000584050 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
CPD-207ENST00000584050 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
CPD-207ENST00000584050 FBLN2P98095 1184 aa12.48□□□□□ -0.41
CPD-207ENST00000584050 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
CPD-207ENST00000584050 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.41
CPD-207ENST00000584050 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.42
CPD-207ENST00000584050 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
CPD-207ENST00000584050 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
CPD-207ENST00000584050 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
CPD-207ENST00000584050 HAX1O00165 279 aa12.37□□□□□ -0.43
CPD-207ENST00000584050 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
CPD-207ENST00000584050 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
CPD-207ENST00000584050 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
CPD-207ENST00000584050 EVX2Q03828 476 aa12.27□□□□□ -0.45
CPD-207ENST00000584050 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
CPD-207ENST00000584050 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
CPD-207ENST00000584050 PRKAR2AP13861 404 aaKnown RBP12.23□□□□□ -0.45
CPD-207ENST00000584050 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
CPD-207ENST00000584050 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
CPD-207ENST00000584050 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
CPD-207ENST00000584050 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
CPD-207ENST00000584050 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
CPD-207ENST00000584050 GABBR2O75899 941 aa11.93□□□□□ -0.5
CPD-207ENST00000584050 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
CPD-207ENST00000584050 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
CPD-207ENST00000584050 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
CPD-207ENST00000584050 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
CPD-207ENST00000584050 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
CPD-207ENST00000584050 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
CPD-207ENST00000584050 LHX8Q68G74 356 aa11.68□□□□□ -0.54
CPD-207ENST00000584050 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
CPD-207ENST00000584050 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
CPD-207ENST00000584050 CLCN6P51797 869 aa11.56□□□□□ -0.56
CPD-207ENST00000584050 DCBLD2Q96PD2 775 aa11.56□□□□□ -0.56
CPD-207ENST00000584050 GALR2O43603 387 aaPredicted RBP11.54□□□□□ -0.56
CPD-207ENST00000584050 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
CPD-207ENST00000584050 PHF12Q96QT6 1004 aa11.52□□□□□ -0.57
CPD-207ENST00000584050 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
CPD-207ENST00000584050 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
CPD-207ENST00000584050 PROM2Q8N271 834 aa11.45□□□□□ -0.58
CPD-207ENST00000584050 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
CPD-207ENST00000584050 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
CPD-207ENST00000584050 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
CPD-207ENST00000584050 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
CPD-207ENST00000584050 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
CPD-207ENST00000584050 CCDC61Q9Y6R9 512 aa11.25□□□□□ -0.61
CPD-207ENST00000584050 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms