RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
SCARB2-205ENST00000511129 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
SCARB2-205ENST00000511129 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
SCARB2-205ENST00000511129 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.68
SCARB2-205ENST00000511129 FOXD1Q16676 465 aa18.26■□□□□ 0.51
SCARB2-205ENST00000511129 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
SCARB2-205ENST00000511129 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
SCARB2-205ENST00000511129 MSH5O43196 834 aa17.07■□□□□ 0.32
SCARB2-205ENST00000511129 PIAS4Q8N2W9 510 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-205ENST00000511129 ADRA2BP18089 450 aa17.02■□□□□ 0.32
SCARB2-205ENST00000511129 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
SCARB2-205ENST00000511129 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-205ENST00000511129 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
SCARB2-205ENST00000511129 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
SCARB2-205ENST00000511129 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
SCARB2-205ENST00000511129 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
SCARB2-205ENST00000511129 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-205ENST00000511129 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
SCARB2-205ENST00000511129 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-205ENST00000511129 KCNA4P22459 653 aa14.76□□□□□ -0.05
SCARB2-205ENST00000511129 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
SCARB2-205ENST00000511129 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-205ENST00000511129 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
SCARB2-205ENST00000511129 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
SCARB2-205ENST00000511129 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
SCARB2-205ENST00000511129 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
SCARB2-205ENST00000511129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
SCARB2-205ENST00000511129 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
SCARB2-205ENST00000511129 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
SCARB2-205ENST00000511129 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-205ENST00000511129 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
SCARB2-205ENST00000511129 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-205ENST00000511129 CAPN15O75808 1086 aa13.72□□□□□ -0.21
SCARB2-205ENST00000511129 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
SCARB2-205ENST00000511129 DSG3P32926 999 aa13.65□□□□□ -0.22
SCARB2-205ENST00000511129 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
SCARB2-205ENST00000511129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-205ENST00000511129 APLP2Q06481 763 aa13.54□□□□□ -0.24
SCARB2-205ENST00000511129 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
SCARB2-205ENST00000511129 ZBTB22O15209 634 aa13.53□□□□□ -0.24
SCARB2-205ENST00000511129 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
SCARB2-205ENST00000511129 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-205ENST00000511129 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-205ENST00000511129 ABCB7O75027 752 aa13.41□□□□□ -0.26
SCARB2-205ENST00000511129 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-205ENST00000511129 POLA2Q14181 598 aa13.15□□□□□ -0.3
SCARB2-205ENST00000511129 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
SCARB2-205ENST00000511129 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
SCARB2-205ENST00000511129 POTEHQ6S545 545 aa13.05□□□□□ -0.32
SCARB2-205ENST00000511129 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
SCARB2-205ENST00000511129 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-205ENST00000511129 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
SCARB2-205ENST00000511129 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
SCARB2-205ENST00000511129 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
SCARB2-205ENST00000511129 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-205ENST00000511129 FBLN2P98095 1184 aa12.56□□□□□ -0.4
SCARB2-205ENST00000511129 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-205ENST00000511129 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
SCARB2-205ENST00000511129 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
SCARB2-205ENST00000511129 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
SCARB2-205ENST00000511129 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
SCARB2-205ENST00000511129 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
SCARB2-205ENST00000511129 FKBP8Q14318 412 aa12.4□□□□□ -0.42
SCARB2-205ENST00000511129 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCARB2-205ENST00000511129 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-205ENST00000511129 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
SCARB2-205ENST00000511129 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-205ENST00000511129 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-205ENST00000511129 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
SCARB2-205ENST00000511129 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
SCARB2-205ENST00000511129 HAX1O00165 279 aa12.19□□□□□ -0.46
SCARB2-205ENST00000511129 PRKAR2AP13861 404 aaKnown RBP12.15□□□□□ -0.46
SCARB2-205ENST00000511129 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
SCARB2-205ENST00000511129 EVX2Q03828 476 aa12.07□□□□□ -0.48
SCARB2-205ENST00000511129 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
SCARB2-205ENST00000511129 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
SCARB2-205ENST00000511129 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
SCARB2-205ENST00000511129 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
SCARB2-205ENST00000511129 PROM2Q8N271 834 aa11.93□□□□□ -0.5
SCARB2-205ENST00000511129 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-205ENST00000511129 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
SCARB2-205ENST00000511129 GABBR2O75899 941 aa11.79□□□□□ -0.52
SCARB2-205ENST00000511129 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
SCARB2-205ENST00000511129 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
SCARB2-205ENST00000511129 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-205ENST00000511129 AMER1Q5JTC6 1135 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-205ENST00000511129 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
SCARB2-205ENST00000511129 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
SCARB2-205ENST00000511129 CLCN6P51797 869 aa11.59□□□□□ -0.55
SCARB2-205ENST00000511129 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
SCARB2-205ENST00000511129 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
SCARB2-205ENST00000511129 MIER1Q8N108 512 aa11.58□□□□□ -0.56
SCARB2-205ENST00000511129 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
SCARB2-205ENST00000511129 MNX1P50219 401 aaPredicted RBP11.57□□□□□ -0.56
SCARB2-205ENST00000511129 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
SCARB2-205ENST00000511129 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
SCARB2-205ENST00000511129 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
SCARB2-205ENST00000511129 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCARB2-205ENST00000511129 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-205ENST00000511129 LHX8Q68G74 356 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 349.9 ms