Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 AC117947.1-201ENST00000427448 529 ntBASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 AL512604.3-201ENST00000569583 964 ntBASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 AC139887.4-201ENST00000607877 719 ntBASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 MIR149-201ENST00000384879 89 ntBASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 MIR3180-5-201ENST00000583743 153 ntBASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 AL445228.2-201ENST00000605589 952 ntBASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDHR3Q6ZTQ4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 AK4P3-201ENST00000418260 669 ntBASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 KRT18P35-201ENST00000510488 1269 ntBASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 AL590326.2-201ENST00000625139 305 ntBASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDHR3Q6ZTQ4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.08■□□□□ 0.49
CDHR3Q6ZTQ4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms