Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF17Q5VTA0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF17Q5VTA0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF17Q5VTA0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF17Q5VTA0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF17Q5VTA0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 AC008687.5-201ENST00000593746 558 ntBASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 LINC01711-201ENST00000598340 967 ntBASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 AC104692.2-201ENST00000603054 253 ntBASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF17Q5VTA0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 GMCL1P1-201ENST00000463439 1581 ntBASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 TNXA-203ENST00000507684 2038 ntBASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 MTCL1P1-201ENST00000446207 792 ntBASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 FAAHP1-202ENST00000446499 1238 ntBASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 FDX1P1-201ENST00000449115 551 ntBASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 AC096582.2-201ENST00000510860 516 ntBASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF17Q5VTA0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.14■□□□□ 0.34
PRAMEF17Q5VTA0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.14■□□□□ 0.34
PRAMEF17Q5VTA0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 WIZP1-201ENST00000531444 2299 ntBASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 KRT8P10-201ENST00000450021 1447 ntBASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms