Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 LINC00602-201ENST00000629776 2065 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 AC073592.3-201ENST00000625118 1834 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 WIZP1-201ENST00000531444 2299 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 AP005117.1-201ENST00000584346 1413 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 AC068472.1-201ENST00000474589 881 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 AC112698.1-201ENST00000510299 916 ntBASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.29■□□□□ 0.04
ARFGEF3Q5TH69 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 AC007613.1-201ENST00000572811 2597 ntBASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ARFGEF3Q5TH69 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 AC018445.3-201ENST00000624177 1945 ntBASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARFGEF3Q5TH69 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms